Welcome to Protein Design
· Main Page
· Account
· Protein Folding Articles
· Recommend This Site
· Contact

Featured Protein Folding Essay
  • Introduction to Protein Folding - The Process and Factors Involved by David C. Yee


  • Search


      



    See all

    Scientists develop split green for tagging protein - Univ of California

    Posted by: joann on Tuesday, January 04, 2005 - 03:21 PM
    Announcements 
    [excerpt] University of California scientists working at Los Alamos National Laboratory have developed a new protein tagging and detection system based on a process for "splitting" a green fluorescent protein. Unlike current protein detection methods, the method works both in living cells and in the test tube and can be used to quantify proteins down to 0.1 picomole, or one billionth of a gram of a typical protein molecule. Because the method can be used to detect protein aggregation within the living organisms, it will be useful for high-throughput studies of protein structure and protein production and for studying diseases, like Alzheimer's, that are associated with protein misfolding and aggregation.


    In research published recently in the online version of the scientific journal Nature Biotechnology, Los Alamos scientists Stéphanie Cabantous, Tom Terwilliger and Geoff Waldo describe a method for engineering soluble, self-associating fragments of green fluorescent proteins that can be used to tag or detect soluble and insoluble proteins in living cells or cell lysates without changing protein solubility.


    Discuss/Submit Comment | Email This

    The Miracles of Water

    Posted by: joann on Monday, January 03, 2005 - 03:53 PM
    Announcements 
    [excerpt] Water is the most abundant substance in our world. It has one of the simplest possible chemical formulas: two hydrogen atoms attached to one oxygen atom (H2O). Yet, it is one of the most anomalous substances known to humanity.


    We all know that it is essential for life. However, probably because of its abundance and simple chemical composition, we often regard this tasteless and odorless substance as being important, but quite simple and ordinary. Scientifically, it is the exact opposite. It appears to show extremely complex and unusual behavior. It is the most studied substance on Earth. Yet, scientists are still puzzled over its strange properties. Even the best computers we have today cannot simulate all of the different properties of water.


    Let us look at an example of the surprising properties of water. The strangeness of water starts with the fact that it exists on Earth. Water, being composed of two fairly light atoms (hydrogen and oxygen), should be in the gas phase at the usual temperature ranges that exist in our world. In fact, all compounds that are close to it (i.e. H2S, H2Se, and H2Te) are found mostly in the gas phase. But, compared to similar substances, it melts about 100 degrees above the expected melting point and it boils about 150 degrees above the expected boiling point (see Figure 1). The result is that it is the only material that exists naturally in all three forms (i.e. as ice, liquid, and vapor) on Earth.


    In addition to the example given in the previous paragraph, water has at least 40 different surprising properties (See for example the “Forty-one anomalies of water” section in Ref 1). But, what is even more astonishing is the fact that most of these anomalous properties of water are absolutely crucial for life. Simply stated, life on Earth depends on these extraordinary aspects of water. Below we will discuss some of the anomalous properties of water and their importance for life. At the end we will briefly try to explain why water behaves so differently.


    Discuss/Submit Comment | Email This

    Gene linked to enlargement of the factory where proteins are processed

    Posted by: joann on Tuesday, November 02, 2004 - 02:41 PM
    Announcements 
    [excerpt] St. Jude, Loyola and Kyoto University report that the system that controls the folding of newly made proteins also triggers the production of new membranes used to package and ship proteins


    Part of a cellular mechanism that regulates the folding of new proteins into their proper shapes also includes a genetic response that enlarges the factory where both protein folding and packaging of proteins occurs. This finding, from researchers at St. Jude Children's Research Hospital, Loyola University (Chicago) and Kyoto University (Kyoto, Japan), are published in the Oct. 15 issue of the Journal of Cell Biology.


    The link between protein folding and factory construction ensures that the two processes are coordinated when the cell is called upon to quickly make, fold and secrete large amounts of specific proteins.


    The investigators discovered that the cell makes a molecule called XBP1 in response to an increased demand on the protein-folding machinery. This increased demand for folded proteins triggers the so-called unfolded protein response (UPR), as well as the expansion of the factory where proteins are folded and packaged so they can be secreted from the cell. The UPR also prompts the cell to make molecules called chaperones, which do the actual task of protein folding.


    XBP1 triggers the cell to make phosphatidylcholine, the major building block of the rows of membranes that make up much of the factory, which is called the endoplasmic reticulum (ER). Membranes in the ER serve as envelopes to package the folded proteins.

    Discuss/Submit Comment | Email This

    Probing Protein Folding

    Posted by: joann on Tuesday, August 24, 2004 - 08:23 PM
    Announcements 
    [excerpt] New method allows study of protein folding under native conditions


    A new method to probe the forces that control higher order structure in proteins under native conditionsthat is, structure-promoting conditions for the proteinhas been developed by chemists at the University of Wisconsin, Madison.



    Discuss/Submit Comment | Email This

    Scientists Visualise Cellular Handmaiden That Restores Shape To Proteins

    Posted by: joann on Tuesday, August 17, 2004 - 10:56 PM
    Announcements 
    [excerpt] A gigantic protein complex responsible for looking after bent out of shape proteins has been visualised by scientists working in Japan and the UK.


    The structure of the chaperonin complex of the bacteria Thermus thermophilus reveals clues about how the important molecule may do its job of folding new or damaged proteins within cells. Led by Professor So Iwata of Imperial College London, the team of scientists announce their findings in this months edition of the journal Structure (August 2004).




    Discuss/Submit Comment | Email This

    Biomimetic nanotechnology

    Posted by: joann on Friday, August 06, 2004 - 11:56 AM
    Announcements 
    [excerpt] Nanotechnology involves the creation and manipulation of complex structures on the scale of nanometers something organisms have done for about 3.8 billion years. Using DNA, RNA, and a huge variety of proteins, living cells build complex molecules and nanoscale organelles, and create nonliving materials, such as tooth enamel, with nanoscale structures. So it is logical for nanotechnologists to seek to duplicate organisms own techniques to try to create new nanomachines from the bottom up.


    Although biomimetic nanotechnology is in its infancy, with no applications yet reaching commercialization, the barriers in some cases lie mainly in scaling up production processes to industrial levels. In others, researchers must make significant basic breakthroughs to bridge the gap between laboratory experiments and usefulness.








    Discuss/Submit Comment | Email This

    Request for contributors, help

    Posted by: david on Wednesday, August 14, 2002 - 10:33 PM
    Announcements 
    Hi- I'm looking for people who are interested in protein research who would like to contribute news, articles, opinions, etc. on a constant basis to the site. I simply don't have the time nor resources to update the site on a constant basis so any help would be great. Anyone who's interested please click on Contact Us on the main menu & drop me a note - thanks!



    Discuss/Submit Comment | Email This

    Welcome to ProteinDesign.com / ProteinFolding.com!

    Posted by: david on Saturday, May 19, 2001 - 11:36 PM
    Announcements 
    Welcome to ProteinDesign.com / ProteinFolding.com! This site is dedicated to providing the latest news on the front of protein research. Whenever I find a relevent research paper I will also post a small excerpt here and link to it. The target audience of this site is anyone who is interested in protein science. I personally have a *fascination* with proteins and their amazing characteristics and capabilities. If you have any suggestions/comments, please feel free to let me know. And if you have any news you like to contribute, please send them over.



    Discuss/Submit Comment | Email This

    << 1 2 3 >>